miRBase entry: aca-mir-363

Stem-loop aca-mir-363


Accession
MI0018860
Description
Anolis carolinensis aca-mir-363 precursor miRNA


Sequence

24337 reads, 8472.0 reads per million, 2 experiments
cuuguguuuugcuguuguCGGGUGGAUCACGAUGCAAUUUUgauuagauuagcaggacgaaAAUUGCACGGUAUCCAUCUGUAaaccgcaggaccuucg
.....(((((((.(((..(((((((((..((.(((((((((..................)))))))))))..)))))))))..))).))))))).....

Structure
cuugu       u   gu         CA  A         gauuagau 
     guuuugc guu  CGGGUGGAU  CG UGCAAUUUU        u
     ||||||| |||  |||||||||  || |||||||||         
     caggacg caa  GUCUACCUA  GC ACGUUAAaa        a
gcuuc       c   AU         UG  -         gcaggacg 


Annotation confidence High
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Genome context
GL344214.1: 24588-24686 [+]
Clustered miRNAs
5 other miRNAs are < 10 kb from aca-mir-363
Name Accession Chromosome Start End Strand Confidence




Database links

Mature aca-miR-363-5p

Accession MIMAT0021945
Description Anolis carolinensis aca-miR-363-5p mature miRNA
Sequence 19 - CGGGUGGAUCACGAUGCAAUUUU - 41
Evidence experimental
Illumina [1]

Mature aca-miR-363-3p

Accession MIMAT0021946
Description Anolis carolinensis aca-miR-363-3p mature miRNA
Sequence 62 - AAUUGCACGGUAUCCAUCUGUA - 83
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107