Stem-loop aca-mir-7-1

Accession

MI0018882

Description

Anolis carolinensis aca-mir-7-1 precursor miRNA

Sequence

2761 reads, 927.0 reads per million, 2 experiments

uguggcugguuucugggUGGAAGACUAGUGAUUUUGUUGUUcugacuuauaauuuagaCAACAAAUCGUAGCCUGCCGCCcagcgaccacagccgagcac
..(((((((((.((((((((.((.(((.((((((.(((((.((((........)))))))))))))))))).)).)))))))).))))..))))).....

Structure

---ug     --    u        A  A   G      U     U    cuu 
     uggcu  gguu cugggUGG AG CUA UGAUUU GUUGU cuga   a
     |||||  |||| |||||||| || ||| |||||| ||||| ||||    
     gccga  ccag gacCCGCC UC GAU GCUAAA CAACa gauu   u
cacga     ca    c        G  C   -      -     -    uaa 

Annotation confidence High

Genome context

Unknown

Mature aca-miR-7-5p

• Accession: MIMAT0021983
• Description: Anolis carolinensis aca-miR-7-5p mature miRNA
• Sequence: 18 - UGGAAGACUAGUGAUUUUGUUGUU - 41
• Evidence: experimental ; Illumina [1]

Mature aca-miR-7-1-3p

• Accession: MIMAT0021984
• Description: Anolis carolinensis aca-miR-7-1-3p mature miRNA
• Sequence: 59 - CAACAAAUCGUAGCCUGCCGCC - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107