Stem-loop aca-mir-7-2

Accession

MI0018883

Description

Anolis carolinensis aca-mir-7-2 precursor miRNA

Sequence

6877 reads, 2338.0 reads per million, 2 experiments

uguuggccuaguucugugUGGAAGACUAGUGAUUUUGUUGUUUuuagauaacuaaauugaCAACAAAUCGCAGUCUACCAUAUGGcacaggccauaaccucu
...((((((.((.((((((((.(((((.(((((((.(((((((((((....)))))..)))))))))))))))))).)))))))).))))))))........

Structure

-----ugu      a  u        A     A       U      --     a 
        uggccu gu cugugUGG AGACU GUGAUUU GUUGUU  Uuuag u
        |||||| || |||||||| ||||| ||||||| ||||||  |||||  
        accgga ca GGUAUACC UCUGA CGCUAAA CAACag  aaauc a
ucuccaau      -  c        A     -       -      uu     a 

Annotation confidence High

Genome context

chr2: 42574641-42574742 [+]

Mature aca-miR-7-5p

• Accession: MIMAT0021983
• Description: Anolis carolinensis aca-miR-7-5p mature miRNA
• Sequence: 19 - UGGAAGACUAGUGAUUUUGUUGUUU - 43
• Evidence: experimental ; Illumina [1]

Mature aca-miR-7-2-3p

• Accession: MIMAT0021985
• Description: Anolis carolinensis aca-miR-7-2-3p mature miRNA
• Sequence: 61 - CAACAAAUCGCAGUCUACCAUAUGG - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107