Stem-loop aca-mir-9-2

Accession

MI0018889

Description

Anolis carolinensis aca-mir-9-2 precursor miRNA

Literature search

1 open access papers mention aca-mir-9-2
(2 sentences)

Sequence

5077 reads, 1793.0 reads per million, 2 experiments

gagggccguuucugUCUUUGGUUAUCUAGCUGUAUGAguguaaucgacccaucaUAAAGCUAGAUAACCGAAAGUAgaaaugacucc
..(((.((((((((.((((((((((((((((.(((((..((.....))...))))).)))))))))))).)))))))))))).))).

Structure

ga   c        U    -            G     -gu  a 
  ggg cguuucug CUUU GGUUAUCUAGCU UAUGA   gu a
  ||| |||||||| |||| |||||||||||| |||||   || u
  cuc guaaagAU GAAA CCAAUAGAUCGA AUacu   ca c
-c   a        -    G            A     acc  g 

Annotation confidence High

Genome context

GL343444.1: 370592-370678 [+]

Mature aca-miR-9-5p

• Accession: MIMAT0021990
• Description: Anolis carolinensis aca-miR-9-5p mature miRNA
• Sequence: 15 - UCUUUGGUUAUCUAGCUGUAUGA - 37
• Evidence: experimental ; Illumina [1]

Mature aca-miR-9-3p

• Accession: MIMAT0057922
• Description: Anolis carolinensis aca-miR-9-3p mature miRNA
• Sequence: 55 - UAAAGCUAGAUAACCGAAAGUA - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107