Stem-loop aca-mir-5395

Accession

MI0018897

Description

Anolis carolinensis aca-mir-5395 precursor miRNA

Sequence

gggaaaugaauucACCCCAAUUGGACUAGUUGCcucuguaugccucuguaucuauaucaaaagacaacuaguccaauuggcaggauuauuuccc
(((((((((.(((...((((((((((((((((.((.((((((..........)))).))..)).))))))))))))))))..))))))))))))

Structure

         a   ACC                C  -c  -    ccuc 
gggaaauga uuc   CCAAUUGGACUAGUUG cu  ug uaug    u
||||||||| |||   |||||||||||||||| ||  || ||||     
cccuuuauu agg   gguuaaccugaucaac ga  ac auau    g
         -   -ac                a  aa  u    cuau 

Annotation confidence Not enough data

Genome context

chr6: 23192984-23193077 [+]

Mature aca-miR-5395

• Accession: MIMAT0022002
• Description: Anolis carolinensis aca-miR-5395 mature miRNA
• Sequence: 14 - ACCCCAAUUGGACUAGUUGC - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107