Stem-loop aca-mir-5398

Accession

MI0018900

Description

Anolis carolinensis aca-mir-5398 precursor miRNA

Sequence

guauggguccuuCUGUUAAUCUCGGCAACUGCuuauuaguaaguggACAGUCACUGGGAUUGACAGAaggaucgaucc
..((.((((((((((((((((((((..((((.(((((....))))).))))..)))))))))))))))))))).))..

Structure

gu  g                    CA    C     a 
  au gguccuuCUGUUAAUCUCGG  ACUG uuauu g
  || ||||||||||||||||||||  |||| |||||  
  ua cuaggaAGACAGUUAGGGUC  UGAC gguga u
cc  g                    AC    A     a 

Annotation confidence Not enough data

Genome context

chr4: 95943331-95943408 [-]

Mature aca-miR-5398-5p

• Accession: MIMAT0022006
• Description: Anolis carolinensis aca-miR-5398-5p mature miRNA
• Sequence: 13 - CUGUUAAUCUCGGCAACUGC - 32
• Evidence: experimental ; Illumina [1]

Mature aca-miR-5398-3p

• Accession: MIMAT0022007
• Description: Anolis carolinensis aca-miR-5398-3p mature miRNA
• Sequence: 47 - ACAGUCACUGGGAUUGACAGA - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107