Stem-loop aca-mir-5400

Accession

MI0018902

Description

Anolis carolinensis aca-mir-5400 precursor miRNA

Sequence

uuggaugaggugguuggaaucaucuccugcagagcucuaguccauucuccugagcaUUAGCACUCUGCAGGAAAGAACgcuaagcaccucauuaaa
...(((((((((.((((.......((((((((((..(((((...(((....))).)))))..)))))))))).......)))).)))))))))...

Structure

uug         g    aaucauc          cu     cca   u 
   gaugaggug uugg       uccugcagag  cuagu   uuc c
   ||||||||| ||||       ||||||||||  |||||   |||  
   uuacuccac aauc       AGGACGUCUC  GAUUa   gag c
aaa         g    gCAAGAA          AC     --c   u 

Annotation confidence Not enough data

Genome context

chr1: 67800013-67800108 [+]

Mature aca-miR-5400

• Accession: MIMAT0022010
• Description: Anolis carolinensis aca-miR-5400 mature miRNA
• Sequence: 57 - UUAGCACUCUGCAGGAAAGAAC - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107