Stem-loop aca-mir-5404

Accession

MI0018907

Description

Anolis carolinensis aca-mir-5404 precursor miRNA

Sequence

caaaggaggcuccggacuggcacggcugguaucuaggccuagcccaCCCCCCGUGCCCUCCAGACUucuuauc
...((((((.((.(((..(((((((..(((.....(((...))).)))..))))))).))).))))))))...

Structure

caa      c  c   cu       cu   aucua   c 
   aggagg uc gga  ggcacgg  ggu     ggc  
   |||||| || |||  |||||||  |||     ||| u
   uucuUC AG CCU  CCGUGCC  CCa     ccg  
cua      -  A   -C       CC   ----c   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature aca-miR-5404

• Accession: MIMAT0022017
• Description: Anolis carolinensis aca-miR-5404 mature miRNA
• Sequence: 47 - CCCCCCGUGCCCUCCAGACU - 66
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107