Accession
MI0018909
Description
Anolis carolinensis
aca-mir-5406 precursor miRNA
Sequence
acaguucuucCUUUUAGACUGGCACUCCUAGAaucucuccgaacaucUAGGAGCGAAACUCUAAAAGAagaaccuc
...(((((((.(((((((.(..(.((((((((.((.....))...)))))))).)..).))))))))))))))...
...(((((((.(((((((.(..(.((((((((.((.....))...)))))))).)..).))))))))))))))...
Structure
aca C C GG A --a u guucuuc UUUUAGA U C CUCCUAGA uc c ||||||| ||||||| | | |||||||| || u caagaAG AAAAUCU A G GAGGAUcu ag c cuc - C AA C aca c
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
GL343282.1: 1474906-1474981 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from aca-mir-5406
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature aca-miR-5406-5p
| Accession | MIMAT0022020 |
| Description | Anolis carolinensis aca-miR-5406-5p mature miRNA |
| Sequence | 11 - CUUUUAGACUGGCACUCCUAGA - 32 |
| Evidence |
experimental
Illumina [1] |
Mature aca-miR-5406-3p
| Accession | MIMAT0022021 |
| Description | Anolis carolinensis aca-miR-5406-3p mature miRNA |
| Sequence | 48 - UAGGAGCGAAACUCUAAAAGA - 68 |
| Evidence |
experimental
Illumina [1] |
References
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