miRBase entry: aca-mir-5409

Stem-loop aca-mir-5409


Accession
MI0018912
Description
Anolis carolinensis aca-mir-5409 precursor miRNA


Sequence


acuauacuauagcugcuuGUAUGGCUGAACAGGCAAGCUgccuuaagcucaugaguagcuugaguguucagccuuuuaagcaacuauaguagaa
....((((((((.((((((...(((((((((..((((((((.(((......)))))))))))..)))))))))...)))))).))))))))...

Structure
acua        c      UAU         GG        c   ag 
    uacuauag ugcuuG   GGCUGAACA  CAAGCUgc uua  c
    |||||||| ||||||   |||||||||  |||||||| |||   
    augauauc acgaau   ccgacuugu  guucgaug agu  u
-aag        a      uuu         ga        -   ac 


Annotation confidence Low
Do you think this miRNA is real?

Genome context
chr5: 115113978-115114071 [-]

Database links


References

  1. PubMed ID: 21775315
    MicroRNAs support a turtle + lizard clade
    "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
    "Biol Lett (2012) 8:104-107