Stem-loop aca-mir-5410

Accession

MI0018913

Description

Anolis carolinensis aca-mir-5410 precursor miRNA

Sequence

uccacCGUUGUCGCGUUCUGAGAUGUCcagcuugugccuggauuucaggCUGACAUCUCAGAACUCGAGAacaguaca
...((.(((.(((.(((((((((((((.((((((...........))))))))))))))))))).))).))).))...

Structure

ucc  C   G   C             c      ugcc 
   ac GUU UCG GUUCUGAGAUGUC agcuug    u
   || ||| ||| ||||||||||||| ||||||    g
   ug caA AGC CAAGACUCUACAG UCggac    g
aca  a   G   U             -      uuua 

Annotation confidence Not enough data

Genome context

Unknown

Mature aca-miR-5410-5p

• Accession: MIMAT0022027
• Description: Anolis carolinensis aca-miR-5410-5p mature miRNA
• Sequence: 6 - CGUUGUCGCGUUCUGAGAUGUC - 27
• Evidence: experimental ; Illumina [1]

Mature aca-miR-5410-3p

• Accession: MIMAT0022028
• Description: Anolis carolinensis aca-miR-5410-3p mature miRNA
• Sequence: 50 - CUGACAUCUCAGAACUCGAGA - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107