Stem-loop aca-mir-5418

Accession

MI0018921

Description

Anolis carolinensis aca-mir-5418 precursor miRNA

Sequence

gucauagcaagcaaucgaacagauaaaugaagagaggaacugggcaucCUUCCUUUCUCAAUCUGUUGCAuugcaugcugucuu
...((((((.(((((..(((((((...(((.((((((((..((....))))))))))))))))))))..))))).))))))...

Structure

guc      a     cg       aaa   a        cu  g 
   auagca gcaau  aacagau   uga gagaggaa  gg c
   |||||| |||||  |||||||   ||| ||||||||  ||  
   ugucgu cguuA  UUGUCUA   ACU CUUUCCUU  Cc a
uuc      a     CG       ---   -        --  u 

Annotation confidence Not enough data

Genome context

chr2: 178713263-178713346 [+]

Mature aca-miR-5418

• Accession: MIMAT0022038
• Description: Anolis carolinensis aca-miR-5418 mature miRNA
• Sequence: 49 - CUUCCUUUCUCAAUCUGUUGCA - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107