Stem-loop aca-mir-5424

Accession

MI0018927

Description

Anolis carolinensis aca-mir-5424 precursor miRNA

Sequence

agaugcagauuuggaugguuguugcccgguggguggggcuacaggccCAGGGUCGGCUGCCAGGAUGGCucucgcgcucu
(((((((((.(((..((((.(((((((..(((((..(....)..)))))))).)))).))))...))).))).))).)))

Structure

   -   -   u   -ga    u    -   gg     gg g 
aga ugc aga uug   uggu guug ccc  ugggu  g c
||| ||| ||| |||   |||| |||| |||  |||||  |  
ucu gcg ucu GGU   ACCG CGGC GGG  ACccg  c u
   c   c   C   AGG    U    U   --     ga a 

Annotation confidence Not enough data

Genome context

GL343805.1: 101473-101552 [-]

Mature aca-miR-5424

• Accession: MIMAT0022044
• Description: Anolis carolinensis aca-miR-5424 mature miRNA
• Sequence: 48 - CAGGGUCGGCUGCCAGGAUGGC - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107