Stem-loop aca-mir-5427

Accession

MI0018930

Description

Anolis carolinensis aca-mir-5427 precursor miRNA

Sequence

ggagacggcggggagaaggagaagggcaaggcuccggaggucaggcucuccAGUCUGGCCCUUCCUCUUCUUUuccucucucc
(((((.((.((((((((((.(((((((.(((((..(((((......)))))))))).))))))).)))))))))))).)))))

Structure

     c  c          a       a     cc     uc 
ggaga gg ggggagaagg gaagggc aggcu  ggagg  a
||||| || |||||||||| ||||||| |||||  |||||   
ccucu uc cuUUUCUUCU CUUCCCG UCUGA  ccucu  g
     c  -          C       G     --     cg 

Annotation confidence Not enough data

Genome context

chr1: 162797257-162797339 [+]

Mature aca-miR-5427

• Accession: MIMAT0022048
• Description: Anolis carolinensis aca-miR-5427 mature miRNA
• Sequence: 52 - AGUCUGGCCCUUCCUCUUCUUU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107