Stem-loop aca-mir-5436

Accession

MI0018939

Description

Anolis carolinensis aca-mir-5436 precursor miRNA

Sequence

uugcuggccucaagcAGCUCGCUGGCAGAGACUUUCUggugaagucagacagCAAGUCUUUGCCAGGGAGCUGcuuguggucaguga
(((((((((.((((((((((.(((((((((((((.(((.((....))..))).))))))))))))).)))))))))).)))))))))

Structure

         u          G             U   -g  a 
uugcuggcc caagcAGCUC CUGGCAGAGACUU CUg  ug a
||||||||| |||||||||| ||||||||||||| |||  ||  
agugacugg guucGUCGAG GACCGUUUCUGAA gac  ac g
         u          G             C   ag  u 

Annotation confidence Low

Genome context

chr4: 151844931-151845017 [+]

Mature aca-miR-5436-5p

• Accession: MIMAT0022057
• Description: Anolis carolinensis aca-miR-5436-5p mature miRNA
• Sequence: 16 - AGCUCGCUGGCAGAGACUUUCU - 37
• Evidence: experimental ; Illumina [1]

Mature aca-miR-5436-3p

• Accession: MIMAT0022058
• Description: Anolis carolinensis aca-miR-5436-3p mature miRNA
• Sequence: 53 - CAAGUCUUUGCCAGGGAGCUG - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107