Stem-loop aca-mir-5438

Accession

MI0018941

Description

Anolis carolinensis aca-mir-5438 precursor miRNA

Sequence

uuuuucaucgggauguuuuguUAUACGGACAUCUUAUGAAGCaagagcuuucuuuugugcccagagguguuuguguagcaggguuggcggaugaaugcagc
...((((((.(....((((((((((((((((((((..(..(((((((....)))))))..)..))))))))))))))))))))....).))))))......

Structure

---uuu      g gaug                    AU AA       c 
      uucauc g    uuuuguUAUACGGACAUCUU  G  GCaagag u
      |||||| |    ||||||||||||||||||||  |  |||||||  
      aaguag c    gggacgauguguuuguggag  c  uguuuuc u
cgacgu      g gguu                    ac cg       u 

Annotation confidence Not enough data

Genome context

GL344200.1: 5484-5584 [-]

Mature aca-miR-5438

• Accession: MIMAT0022060
• Description: Anolis carolinensis aca-miR-5438 mature miRNA
• Sequence: 22 - UAUACGGACAUCUUAUGAAGC - 42
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107