Stem-loop aca-mir-5442

Accession

MI0018945

Description

Anolis carolinensis aca-mir-5442 precursor miRNA

Sequence

cauggccugaugaaggggcacaguuuccccaugucuauuagccaaggcaaaacagcugACAGGCAAGGGGAAGCGGUAcuucuccaucaggcugcc
...(((((((((.(((((.((.((((((((.(((((.(((((...(......).))))).))))).)))))))).)).))))).)))))))))...

Structure

cau         a     c  a        a     a     caa gc 
   ggccugaug agggg ac guuucccc ugucu uuagc   g  a
   ||||||||| ||||| || |||||||| ||||| |||||   |   
   ucggacuac ucuuc UG CGAAGGGG ACGGA Agucg   c  a
ccg         c     A  G        A     C     --a aa 

Annotation confidence Not enough data

Genome context

GL343456.1: 176730-176825 [-]

Mature aca-miR-5442

• Accession: MIMAT0022064
• Description: Anolis carolinensis aca-miR-5442 mature miRNA
• Sequence: 59 - ACAGGCAAGGGGAAGCGGUA - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107