Stem-loop aca-mir-5443

Accession

MI0018946

Description

Anolis carolinensis aca-mir-5443 precursor miRNA

Sequence

ugacuaagcugucaaucaaaguacuuguuguacaugacugugacacugaauccaUGUAGAACAAGGAUUUUGAUuggcaguuggaaa
......((((((((((((((((.((((((.((((((................)))))).)))))).)))))))))))))))).....

Structure

ugacua                a      g      acuguga 
      agcugucaaucaaagu cuuguu uacaug       c
      |||||||||||||||| |||||| ||||||        
      uugacgguUAGUUUUA GAACAA AUGUac       a
-aaagg                G      G      cuaaguc 

Annotation confidence Not enough data

Genome context

chr1: 82315569-82315655 [+]

Mature aca-miR-5443

• Accession: MIMAT0022065
• Description: Anolis carolinensis aca-miR-5443 mature miRNA
• Sequence: 55 - UGUAGAACAAGGAUUUUGAU - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107