Stem-loop aca-mir-5446

Accession

MI0018949

Description

Anolis carolinensis aca-mir-5446 precursor miRNA

Sequence

ucuuaacuuucaaaggccuauucagggugaugaauccaucccaauaagaUUCAGAACCUUGAAUAGCCCCuuuaaagguuggaa
..((((((((.(((((.(((((((((((..((((((...........))))))..)))))))))))..))))).))))))))..

Structure

uc        c     -c           ga      cauc 
  uuaacuuu aaagg  cuauucagggu  ugaauc    c
  |||||||| |||||  |||||||||||  ||||||    c
  gguuggaa uuuCC  GAUAAGUUCCA  ACUUag    a
aa        a     CC           AG      aaua 

Annotation confidence Not enough data

Genome context

chr2: 9527402-9527485 [+]

Mature aca-miR-5446

• Accession: MIMAT0022068
• Description: Anolis carolinensis aca-miR-5446 mature miRNA
• Sequence: 50 - UUCAGAACCUUGAAUAGCCCC - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107