Stem-loop aca-mir-5449

Accession

MI0018952

Description

Anolis carolinensis aca-mir-5449 precursor miRNA

Sequence

cucuaggaaucuuuagaucuuccggugcaauuuuauggucagcauccaauuaaaguugUCCAUAGGGUUAUGCUGGGAGAccuagaaauuccuauaca
...(((((((.(((((.((((((((((.((((((((((.((((...........)))).)))))))))).)))))))))).))))).)))))))....

Structure

-cuc       c     a          c          u    aucc 
    uaggaau uuuag ucuuccggug aauuuuaugg cagc    a
    ||||||| ||||| |||||||||| |||||||||| ||||    a
    auccuua agauc AGAGGGUCGU UUGGGAUACC guug    u
acau       a     c          A          U    aaau 

Annotation confidence Not enough data

Genome context

GL343211.1: 1448887-1448984 [+]

Mature aca-miR-5449

• Accession: MIMAT0022071
• Description: Anolis carolinensis aca-miR-5449 mature miRNA
• Sequence: 59 - UCCAUAGGGUUAUGCUGGGAGA - 80
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107