Stem-loop aca-mir-5450

Accession

MI0018953

Description

Anolis carolinensis aca-mir-5450 precursor miRNA

Sequence

ugcuuugagggauuAGAGUUCUCAGAAUCUUCCAauuggcacauauacacuggaagauuuugagaacuauggucuccaaaaac
...((((.(((((((.((((((((((((((((((..((.........)).)))))))))))))))))).)))))))))))...

Structure

ugc    a       G                  au  gca 
   uuug gggauuA AGUUCUCAGAAUCUUCCA  ug   c
   |||| ||||||| ||||||||||||||||||  ||   a
   aaac cucuggu ucaagaguuuuagaaggu  ac   u
caa    -       a                  -c  aua 

Annotation confidence Not enough data

Genome context

chr2: 94292263-94292345 [+]

Mature aca-miR-5450

• Accession: MIMAT0022072
• Description: Anolis carolinensis aca-miR-5450 mature miRNA
• Sequence: 15 - AGAGUUCUCAGAAUCUUCCA - 34
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107