Stem-loop aca-mir-5454

Accession

MI0018959

Description

Anolis carolinensis aca-mir-5454 precursor miRNA

Sequence

uauagccauccaugacugagcagugguaggaugauguuuacugucccagaaUAUCAUUUUACACUGCUCUAUCaugaaugguuucu
...((((((.(((((..((((((((.((((((((((((..(((...)))))))))))))))))))))))..))))).))))))...

Structure

uau      c     cu        g            ua   u 
   agccau cauga  gagcagug uaggaugauguu  cug  
   |||||| |||||  |||||||| ||||||||||||  ||| c
   uuggua guaCU  CUCGUCAC AUUUUACUAUaa  gac  
ucu      a     AU        -            --   c 

Annotation confidence Not enough data

Genome context

chr2: 139092961-139093046 [+]

Mature aca-miR-5454

• Accession: MIMAT0022080
• Description: Anolis carolinensis aca-miR-5454 mature miRNA
• Sequence: 52 - UAUCAUUUUACACUGCUCUAUC - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107