Stem-loop aca-mir-5455

Accession

MI0018960

Description

Anolis carolinensis aca-mir-5455 precursor miRNA

Sequence

ugcuuguacaggguauUUGAAAAAGAAGUCCCUAGUUCccauuaauuuauacuuaaaacuaggGAGUUCUUUUUCAAACACCCUGuauaaaaa
...(((((((((((.((((((((((((.(((((((((...................))))))))).)))))))))))).)))))))))))...

Structure

ugc           a            G         Cccauuaa 
   uuguacagggu uUUGAAAAAGAA UCCCUAGUU        u
   ||||||||||| |||||||||||| |||||||||        u
   aauauGUCCCA AAACUUUUUCUU AGggaucaa        u
aaa           C            G         aauucaua 

Annotation confidence Not enough data

Genome context

chr1: 3181257-3181349 [-]

Mature aca-miR-5455-5p

• Accession: MIMAT0022081
• Description: Anolis carolinensis aca-miR-5455-5p mature miRNA
• Sequence: 17 - UUGAAAAAGAAGUCCCUAGUUC - 38
• Evidence: experimental ; Illumina [1]

Mature aca-miR-5455-3p

• Accession: MIMAT0022082
• Description: Anolis carolinensis aca-miR-5455-3p mature miRNA
• Sequence: 64 - GAGUUCUUUUUCAAACACCCUG - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107