Stem-loop aca-mir-5457

Accession

MI0018962

Description

Anolis carolinensis aca-mir-5457 precursor miRNA

Sequence

gucccagcuaggguagaccuauugaaucaguguguuaaguguuuacucgccauUCAACAGCUGAUUCAUUGGAUCuacucugguugguuu
...((((((((((((((.(((.(((((((((.((((.((((.........)))).))))))))))))).))).))))))))))))))...

Structure

guc              c   u         g    a    uuu 
   ccagcuaggguaga cua ugaaucagu uguu agug   a
   |||||||||||||| ||| ||||||||| |||| ||||   c
   gguuggucucauCU GGU ACUUAGUCG ACAA Uuac   u
uuu              A   U         -    C    cgc 

Annotation confidence Not enough data

Genome context

chr1: 230956062-230956151 [-]

Mature aca-miR-5457

• Accession: MIMAT0022084
• Description: Anolis carolinensis aca-miR-5457 mature miRNA
• Sequence: 54 - UCAACAGCUGAUUCAUUGGAUC - 75
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107