Stem-loop aca-mir-5444b

Accession

MI0018965

Description

Anolis carolinensis aca-mir-5444b precursor miRNA

Sequence

gcaugcuucuuucaagCUCUGUUAGCAUGAACUAGGCUucaagauuccaaaagccuaguucaugucaagagagugugaagaaagcaaga
...(((((.(((((.(((((.((.(((((((((((((((...........))))))))))))))).)).))))).))))).)))))...

Structure

gca     c     a     G  A               caag 
   ugcuu uuuca gCUCU UU GCAUGAACUAGGCUu    a
   ||||| ||||| ||||| || |||||||||||||||    u
   acgaa gaagu ugaga aa uguacuugauccgaa    u
aga     a     g     g  c               aacc 

Annotation confidence Not enough data

Genome context

chr2: 20862194-20862282 [+]

Mature aca-miR-5444b

• Accession: MIMAT0022087
• Description: Anolis carolinensis aca-miR-5444b mature miRNA
• Sequence: 17 - CUCUGUUAGCAUGAACUAGGCU - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107