Stem-loop aca-mir-5461

Accession

MI0018967

Description

Anolis carolinensis aca-mir-5461 precursor miRNA

Sequence

aaaccagacuugagcaguuguagggcuaugcauuaggacccagaauguaaucUCAAUGCACUGCACUGCACUGCuuagcuuuggaac
...(((((.(((((((((.((((.((..((((((.(((............))).))))))..)).))))))))))))).)))))...

Structure

aaa     c         u    g  ua      a   cccag 
   ccaga uugagcagu guag gc  ugcauu gga     a
   ||||| ||||||||| |||| ||  |||||| |||      
   gguuu gauuCGUCA CGUC CG  ACGUAA Ucu     a
caa     c         -    A  UC      C   aaugu 

Annotation confidence Not enough data

Genome context

GL343193.1: 5139558-5139644 [+]

Mature aca-miR-5461

• Accession: MIMAT0022089
• Description: Anolis carolinensis aca-miR-5461 mature miRNA
• Sequence: 53 - UCAAUGCACUGCACUGCACUGC - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107