Stem-loop aca-mir-5435c

Accession

MI0018969

Description

Anolis carolinensis aca-mir-5435c precursor miRNA

Sequence

auggagucauacUGGAGGAUCUAGCAAAUGCCUAGaaaaaauaacuuUAGGCAUUACUAGGACCUCCGGCucgucugu
...(((((.....(((((.(((((..((((((((((.........)))))))))).))))).))))))))))......

Structure

---aug     auacU     A     CA          aaa 
      gaguc     GGAGG UCUAG  AAUGCCUAGa   a
      |||||     ||||| |||||  ||||||||||   a
      cuCGG     CCUCC GGAUC  UUACGGAUuu   u
ugucug     -----     A     -A          caa 

Annotation confidence Not enough data

Genome context

GL343325.1: 393517-393594 [-]

Mature aca-miR-5435c-3p

• Accession: MIMAT0022092
• Description: Anolis carolinensis aca-miR-5435c-3p mature miRNA
• Sequence: 13 - UGGAGGAUCUAGCAAAUGCCUAG - 35
• Evidence: experimental ; Illumina [1]

Mature aca-miR-5435c-5p

• Accession: MIMAT0022093
• Description: Anolis carolinensis aca-miR-5435c-5p mature miRNA
• Sequence: 48 - UAGGCAUUACUAGGACCUCCGGC - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21775315
   MicroRNAs support a turtle + lizard clade
   "Lyson TR, Sperling EA, Heimberg AM, Gauthier JA, King BL, Peterson KJ"
   "Biol Lett (2012) 8:104-107