Accession
MI0019005
Description
Oryza sativa
osa-MIR5487 precursor miRNA
Literature search
3 open access papers mention osa-MIR5487
(4 sentences)
(4 sentences)
Sequence
8989
reads,
57.0
reads per million, 58 experiments
agaacagcuaAAAGAUGUGCAUGUAGUUCCGgcuuaauuaagcgaguuugguguuaugacaagcugguuggaguacucguauuugaugaacauccucauuuuaaaauuuuaaugauuggaagagugaaauauugaguagauggcaucauggcuaugcAUAUGCUCUCUUCCCAUACUUaaaauuaauggccuguauugcaugucacacuaccgcuguugg
..((((((....((.((((((((((((.(.((((......(((.((((((.........)))))).)))(((....((((.....))))...))).........((((((((..((.(((((((.(..((((...((..(((((......))))))))))).).))))))).))..))))))))...)))).).)))))))).))))))...))))))..
..((((((....((.((((((((((((.(.((((......(((.((((((.........)))))).)))(((....((((.....))))...))).........((((((((..((.(((((((.(..((((...((..(((((......))))))))))).).))))))).))..))))))))...)))).).)))))))).))))))...))))))..
Structure
ag uaAA A - U C uaauuaagcgaguuugguguuaugacaagcugguuggaguacucguauuugaugaacauccucauuuuaa ug u u aa uga ag au aacagc AG UGUG CAUGUAGU C Ggcu aauuuuaa au ggaagag g auau gu auggc c |||||| || |||| |||||||| | |||| |||||||| || ||||||| | |||| || ||||| uugucg uc acac guacguua g ccgg uuaaaaUU UA CCUUCUC C UAUA cg uaucg a gg -cca - u u u -------------------------------------------------------------------uaa CA C U -G --- -- gu
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
4: 17569162-17569381 [+]
Database links
Mature osa-miR5487-5p
| Accession | MIMAT0022120 |
| Description | Oryza sativa osa-miR5487-5p mature miRNA |
| Sequence | 11 - AAAGAUGUGCAUGUAGUUCCG - 31 |
| Evidence |
experimental
Illumina [1] |
Mature osa-miR5487-3p
| Accession | MIMAT0056203 |
| Description | Oryza sativa osa-miR5487-3p mature miRNA |
| Sequence | 158 - AUAUGCUCUCUUCCCAUACUU - 178 |
| Evidence |
experimental
unknown |
References
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