Accession
MI0019012
Description
Oryza sativa
osa-MIR5494 precursor miRNA
Sequence
3073
reads,
27.0
reads per million, 47 experiments
auuuguuucuUUAUAGGAGGUAUAGACGGUAgccacgucacuuucuuuuugccuaaucccaugcacgagaacugAAGCCCCUCUCUGUAUCUUGAUaugacaucgcauagaaacaaga
..(((((((((((((.((((((((((.((..((....(((..(((((..(((..........))).))))).))).))..)).))))))))))..)))))........))))))))..
..(((((((((((((.((((((((((.((..((....(((..(((((..(((..........))).))))).))).))..)).))))))))))..)))))........))))))))..
Structure
au -------- -G C UA cacg cu uu cuaa uuguuucu UUAUA GAGGUAUAGA GG gc uca uucuu ugc u |||||||| ||||| |||||||||| || || ||| ||||| ||| aacaaaga aguaU UUCUAUGUCU UC CG Agu aagag acg c ag uacgcuac AG C CC ---A -c -c uacc
Annotation confidence
Medium
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Genome context
1: 2317278-2317395 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from osa-MIR5494
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature osa-miR5494-5p
| Accession | MIMAT0022127 |
| Description | Oryza sativa osa-miR5494-5p mature miRNA |
| Sequence | 11 - UUAUAGGAGGUAUAGACGGUA - 31 |
| Evidence |
experimental
Illumina [1] |
Mature osa-miR5494-3p
| Accession | MIMAT0056209 |
| Description | Oryza sativa osa-miR5494-3p mature miRNA |
| Sequence | 75 - AAGCCCCUCUCUGUAUCUUGAU - 96 |
| Evidence |
experimental
unknown |
References
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