Accession
MI0019013
Description
Oryza sativa
osa-MIR5495 precursor miRNA
Literature search
1 open access papers mention osa-MIR5495
(2 sentences)
(2 sentences)
Sequence
2636
reads,
34.0
reads per million, 32 experiments
acauaacccgAGAGGUCCGGAUCGAACGUAGgaauagucaagaaaauggcaaacaaacguaccgcguauugucucuuacagccuuauagcacauucugcacucuugucucaugggcugugcacauuguuuugauacccauggagaucauugugaccucguuggccugcgcaagccauuucacuaucuucuucucccagggugcuaugugaauuaauuucuUGAACUCUUAGACUUUGCUuugauccuggccuuucuugaaaugg
.(((.....((((((((.((((((((.(((((((.((((((((((..(((((....((((...)))).)))))...((((((((...((.(((...........)))))...))))))))(((((.((......((((..(((((.....((((......((((........))))..))))........)))))..)))))).)))))......))))))).))).))....))))))))))))).)))))))).....))).
.(((.....((((((((.((((((((.(((((((.((((((((((..(((((....((((...)))).)))))...((((((((...((.(((...........)))))...))))))))(((((.((......((((..(((((.....((((......((((........))))..))))........)))))..)))))).)))))......))))))).))).))....))))))))))))).)))))))).....))).
Structure
a aaccc C C ---- u - auggcaaacaaacguaccgcguauugucucuuacagccuuauagcacauucugcacucuugucucaugggcugug u uuugau au ---ucauu ccucgu cug cau gAGAGGUC GGAUCGAA GUAGg aa agu caagaaa cacau gu accc ggaga guga uggc c ||| |||||||| |||||||| ||||| || ||| ||||||| ||||| || |||| ||||| |||| |||| gua cuuuccgg ccuaguuU CGUUU UU UCA GUucuuu gugua cg uggg ccucu cacu accg g g aaguu u - CAGA C A ---------------------------------------------------------------------aauuaa u ------ ac ucuucuau ----uu aac
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
2: 20298332-20298595 [+]
Database links
Mature osa-miR5495-5p
| Accession | MIMAT0022128 |
| Description | Oryza sativa osa-miR5495-5p mature miRNA |
| Sequence | 11 - AGAGGUCCGGAUCGAACGUAG - 31 |
| Evidence |
experimental
Illumina [1] |
Mature osa-miR5495-3p
| Accession | MIMAT0056210 |
| Description | Oryza sativa osa-miR5495-3p mature miRNA |
| Sequence | 221 - UGAACUCUUAGACUUUGCU - 239 |
| Evidence |
experimental
unknown |
References
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