Stem-loop osa-MIR5496

Accession

MI0019014

Description

Oryza sativa osa-MIR5496 precursor miRNA

Sequence

ggacgucaugCCAGCCGGUGGCAUAGUUCUCgugaagcccggacgaguacuagcguauccgcugaguacagauuaucgagacgucg
.((((((.(((((((.((((((.((((.(((((.........))))).)))))).)))).)))).)))...........)))))).

Structure

g      ----------a   -    C    -  A    U     gaa 
 gacguc           ugC CAGC GGUG GC UAGU CUCgu   g
 ||||||           ||| |||| |||| || |||| |||||   c
 cugcag           aug gucg cuau cg auca gagca   c
g      agcuauuagac   a    c    g  -    u     ggc 

Annotation confidence Not enough data

Genome context

Chr2: 22859724-22859809 [-]

Mature osa-miR5496

• Accession: MIMAT0022129
• Description: Oryza sativa osa-miR5496 mature miRNA
• Sequence: 11 - CCAGCCGGUGGCAUAGUUCUC - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21679406
   Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa
   Wei LQ, Yan LF, Wang T
   Genome Biol (2011) 12:R53