Accession
MI0019020
Description
Oryza sativa
osa-MIR5502 precursor miRNA
Sequence
15586
reads,
50.0
reads per million, 139 experiments
aggauggucugugcCGCGGUCCUUCUGUGUCUUGGCUUgaacaagggcucgugcccaggucccagccucaaacggcgcgggucggggccugcguuaccccgauacgcugaUACGGAUACGGAUACGCGAUACgguguuaccg
.....((((((((.((((((((.((((((((..((((.(.((..((((....))))..)).).)))).........(((.(((((((.........))))))).))).))))))))...)))).)))).)))))....))).
.....((((((((.((((((((.((((((((..((((.(.((..((((....))))..)).).)))).........(((.(((((((.........))))))).))).))))))))...)))).)))).)))))....))).
Structure
aggau ---- c - --U ---------------------------------------UU U a aa u
ggu cugug CGCG GUCC UCUGUGUC GGCU g ac gggc c
||| ||||| |||| |||| |||||||| |||| | || ||||
cca ggCAU GCGC UAGG AGGCAUag ccga c ug cccg g
----g uugu A A CAU ucgcauagccccauugcguccggggcugggcgcggcaaacu c c ga u
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
5: 28979936-28980077 [-]
Database links
Mature osa-miR5502-5p
| Accession | MIMAT0056216 |
| Description | Oryza sativa osa-miR5502-5p mature miRNA |
| Sequence | 15 - CGCGGUCCUUCUGUGUCUUGGCUU - 38 |
| Evidence |
experimental
unknown |
Mature osa-miR5502-3p
| Accession | MIMAT0022135 |
| Description | Oryza sativa osa-miR5502-3p mature miRNA |
| Sequence | 111 - UACGGAUACGGAUACGCGAUAC - 132 |
| Evidence |
experimental
Illumina [1] |
| Database links |
|
References
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