Accession
MI0019025
Description
Oryza sativa
osa-MIR5507 precursor miRNA
Sequence
946
reads,
6.0
reads per million, 58 experiments
aaagcauauauuggguugucgguuuucauaaaaaaacagucugguucagccaguucuagcaggucuAAUUGCAUGGACUCUCUAUGAGGAaauacgauccugugagggugcugguuagcugcaccaaugugauggaggccccagcugcauagcgcgcgacucacgccagcagcgagcgcacucuggaccauacaucagauuccaccacgauggcAAUGAGAAUGAUGACCCGGUGaaaugacaac
....(((.(((((((((((((.(((((((........((.(((((...)))))..)).((((..(((((..((.(.((((((....((((.......))))..)))))).)))))))))))).(((.((((.(((((((.(..(((((...(((.(.....).)))..)))))..).))..(((((........)))))))))).)))).)))..))))))))))))))))))))..))).....
....(((.(((((((((((((.(((((((........((.(((((...)))))..)).((((..(((((..((.(.((((((....((((.......))))..)))))).)))))))))))).(((.((((.(((((((.(..(((((...(((.(.....).)))..)))))..).))..(((((........)))))))))).)))).)))..))))))))))))))))))))..))).....
Structure
-aaag -a g ----------------------------------------------------------------aaaaaaacagucugguucagccaguucua gu UG U G UAUG aa
cau uauuggguugucg uuuucau gcag cuAAU CA G ACUCUC AGGA u
||| ||||||||||||| ||||||| |||| ||||| || | |||||| |||| a
gua GUGGCCCAGUAGU AAGAGUA cguc gauug gu c ugggag uccu c
caaca aa - Acgguagcaccaccuuagacuacauaccaggucucacgcgagcgacgaccgcacucagcgcgcgauacgucgaccccggagguaguguaacca -- -- - g --ug ag
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
12: 21019878-21020122 [-]
Database links
Mature osa-miR5507-5p
| Accession | MIMAT0056220 |
| Description | Oryza sativa osa-miR5507-5p mature miRNA |
| Sequence | 67 - AAUUGCAUGGACUCUCUAUGAGGA - 90 |
| Evidence |
experimental
unknown |
Mature osa-miR5507-3p
| Accession | MIMAT0022140 |
| Description | Oryza sativa osa-miR5507-3p mature miRNA |
| Sequence | 215 - AAUGAGAAUGAUGACCCGGUG - 235 |
| Evidence |
experimental
Illumina [1] |
References
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