Stem-loop osa-MIR5511

Accession

MI0019029

Description

Oryza sativa osa-MIR5511 precursor miRNA

Literature search

1 open access papers mention osa-MIR5511
(1 sentences)

Sequence

reads, None reads per million, experiments

uugguggaagaaggccaaguguuugggauguuggaaauaacuuccuagcuggcuggccuaagaaauuuucauagacaaagagccguuucaaaccaugCAUAUCCCAGCUGUUUCGGCCuugcugcauu
...(((.(..(((((((((...(((((((((.((((.....))))....(((((...(((.(((...))).)))......))))).............)))))))))...))).))))))..).))).

Structure

uug   g ag      -   ugu         uggaaauaacuuccuagc     ---ggc   a   a 
   gug a  aaggcc aag   uugggaugu                  uggcu      cua gaa  
   ||| |  |||||| |||   |||||||||                  |||||      ||| ||| u
   uac u  uuCCGG UUU   GACCCUAUA                  gccga      gau cuu  
--u   g cg      C   GUC         -----Cguaccaaacuuu     gaaaca   a   u 

Annotation confidence Not enough data

Genome context

Chr4: 14653011-14653138 [-]

Mature osa-miR5511

• Accession: MIMAT0022144
• Description: Oryza sativa osa-miR5511 mature miRNA
• Sequence: 98 - CAUAUCCCAGCUGUUUCGGCC - 118
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21679406
   Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa
   Wei LQ, Yan LF, Wang T
   Genome Biol (2011) 12:R53