Stem-loop osa-MIR5518

Accession

MI0019037

Description

Oryza sativa osa-MIR5518 precursor miRNA

Sequence

aaucaaggagagaauagucccgauuccugcuuacugcaugccuuauuuggaugugcccaaauucagaccgggucacauauauggugcauuuuaauguaaaaucuagggccaaacauaaucacgauucuuugcAUACUCAAACAGGGCAUUGCAguucauugau
....(((.((.((((.......)))))).)))((((((((((((.(((((((((((((...........))).)))))...((((.(((((((...))))))...).))))..........(((....))).....))))).)))))).))))))........

Structure

aaucaaggagagaauagucccgauuccugcuu      -      a     augugcccaaauucagaccgggucacauaua    g ---      a 
                                acugca ugccuu uuugg                               uggu c   auuuua  
                                |||||| |||||| |||||                               |||| |   |||||| u
                                ugACGU ACGGGA AAACU                               accg g   uaaaau  
------------------------uaguuacu      U      C     ------CAUAcguuucuuagcacuaauacaa    g auc      g 

Annotation confidence Not enough data

Genome context

Chr7: 9526304-9526466 [+]

Mature osa-miR5518

• Accession: MIMAT0022152
• Description: Oryza sativa osa-miR5518 mature miRNA
• Sequence: 133 - AUACUCAAACAGGGCAUUGCA - 153
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21679406
   Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa
   Wei LQ, Yan LF, Wang T
   Genome Biol (2011) 12:R53