Stem-loop osa-MIR5531

Accession

MI0019051

Description

Oryza sativa osa-MIR5531 precursor miRNA

Sequence

ggauucaagcuggugACUGACUGCCUUGAGCUCCGGGcaugguucuaccuugcacuugaggaguaugaggcugcagugcgggauauca
.(((.....((.((.((((.(.((((((.((((((((((.(((...))).))).))...))))).)))))).))))))).))..))).

Structure

g   ucaag  g  g    A U      A     ---  -   u   u 
 gau     cu gu ACUG C GCCUUG GCUCC   GG Gca ggu  
 |||     || || |||| | |||||| |||||   || ||| ||| c
 cua     gg cg ugac g cggagu ugagg   uc cgu cca  
a   ---ua  g  -    - u      a     agu  a   u   u 

Annotation confidence Not enough data

Genome context

Chr3: 10288528-10288615 [+]

Mature osa-miR5531

• Accession: MIMAT0022166
• Description: Oryza sativa osa-miR5531 mature miRNA
• Sequence: 16 - ACUGACUGCCUUGAGCUCCGGG - 37
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21679406
   Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa
   Wei LQ, Yan LF, Wang T
   Genome Biol (2011) 12:R53