Accession
MI0019055
Description
Oryza sativa
osa-MIR5534b precursor miRNA
Sequence
5180
reads,
15.0
reads per million, 118 experiments
aacuuuguuCGAUGACAACAGCUAGAAUGGccgcggcgacggaggauugucccccgaugaggccgccAUUCUAGCUGUUGUUGUCGAGacgcuaaagu
.((((((((((((((((((((((((((((((.((..((.(((.(((...))).))).))..)).))))))))))))))))))))))))....))))))
.((((((((((((((((((((((((((((((.((..((.(((.(((...))).))).))..)).))))))))))))))))))))))))....))))))
Structure
a ---- c gg a a u acuuug uuCGAUGACAACAGCUAGAAUGGc gc cg cgg gga |||||| |||||||||||||||||||||||| || || ||| ||| u ugaaau GAGCUGUUGUUGUCGAUCUUAccg cg gu gcc ccu - cgca c ga a c g
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
11: 6404422-6404519 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from osa-MIR5534b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature osa-miR5534b-5p
| Accession | MIMAT0022170 |
| Description | Oryza sativa osa-miR5534b-5p mature miRNA |
| Sequence | 10 - CGAUGACAACAGCUAGAAUGG - 30 |
| Evidence |
experimental
Illumina [1] |
Mature osa-miR5534b-3p
| Accession | MIMAT0056247 |
| Description | Oryza sativa osa-miR5534b-3p mature miRNA |
| Sequence | 68 - AUUCUAGCUGUUGUUGUCGAG - 88 |
| Evidence |
experimental
unknown |
References
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