Stem-loop osa-MIR5537

Accession

MI0019058

Description

Oryza sativa osa-MIR5537 precursor miRNA

Sequence

3 reads, 4 reads per million, 2 experiments

uuguuuuauuaauugacuagaaaaauguccgugcauuacaacgggugaaaaauuucuaaugauaauauauauuuuucaugcauaaccaugucaauggcAAUGUUUGUAUGGAUCGUUUGUagcuaaaaca
.(((((((......(.(((.(((...(((((((((..(((..(.(((((((((.................))))))))).)....((((....))))...))).)))))))))..))).)))))))))))

Structure

u       uuaauu a   g   aau         uu   -----------------ac g         uucuaau 
 uguuuua      g cua aaa   guccgugca  aca                   g gugaaaaau       g
 |||||||      | ||| |||   |||||||||  |||                   | |||||||||       a
 acaaaau      c gaU UUU   UAGGUAUGU  UGU                   c uacuuuuua       u
-       ------ -   G   -GC         -U   AAcgguaacuguaccaaua g         uauauaa 

Annotation confidence Not enough data

Genome context

Chr10: 11112663-11112792 [+]

Mature osa-miR5537

• Accession: MIMAT0022173
• Description: Oryza sativa osa-miR5537 mature miRNA
• Sequence: 99 - AAUGUUUGUAUGGAUCGUUUGU - 120
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21679406
   Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa
   Wei LQ, Yan LF, Wang T
   Genome Biol (2011) 12:R53