Stem-loop osa-MIR5543

Accession

MI0019064

Description

Oryza sativa osa-MIR5543 precursor miRNA

Sequence

1 reads, 1 reads per million, 1 experiments

auugaaaucaUAUGAAUGGUAUAUUUUCUUGcaacauguguaauuaauaccaaagcaccuacacauguuacaagaaaauauacgguuuauaugauuucaguu
(((((((((((((((((.(((((((((((((.((((((((((.................)))))))))).))))))))))))).))))))))))))))))).

Structure

-                 G             c          auuaaua 
 auugaaaucaUAUGAAU GUAUAUUUUCUUG aacaugugua       c
 ||||||||||||||||| ||||||||||||| ||||||||||       c
 ugacuuuaguauauuug cauauaaaagaac uuguacacau       a
u                 g             a          ccacgaa 

Annotation confidence Not enough data

Genome context

Chr4: 16417248-16417349 [-]

Mature osa-miR5543

• Accession: MIMAT0022179
• Description: Oryza sativa osa-miR5543 mature miRNA
• Sequence: 11 - UAUGAAUGGUAUAUUUUCUUG - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21679406
   Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa
   Wei LQ, Yan LF, Wang T
   Genome Biol (2011) 12:R53