Stem-loop sbi-MIR5570

Accession

MI0019106

Description

Sorghum bicolor sbi-MIR5570 precursor miRNA

Sequence

aaaagAAAAGACAAAUCAGCAUGUCAguugaugcaguugcgccugugaacugugcaugugugaucugcaaccugccucaguugacaugcugauuugucuuuuguuu
.(((.(((((((((((((((((((((((((((((((((((((.(((.......))).)))))).))))).......)))))))))))))))))))))))))).)))

Structure

a   g                          -------     -      c   ga 
 aaa AAAAGACAAAUCAGCAUGUCAguuga       ugcag uugcgc ugu  a
 ||| ||||||||||||||||||||||||||       ||||| |||||| |||  c
 uuu uuuucuguuuagucguacaguugacu       acguc agugug acg  u
-   g                          ccgucca     u      u   ug 

Annotation confidence Not enough data

Genome context

chr4: 47082724-47082829 [-]

Mature sbi-miR5570

• Accession: MIMAT0022251
• Description: Sorghum bicolor sbi-miR5570 mature miRNA
• Sequence: 6 - AAAAGACAAAUCAGCAUGUCA - 26
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 21907786
   Identification and temporal expression analysis of conserved and novel microRNAs in Sorghum
   "Zhang L, Zheng Y, Jagadeeswaran G, Li Y, Gowdu K, Sunkar R"
   "Genomics (2011) 98:460-468