miRBase entry: hsa-mir-5681a

Stem-loop hsa-mir-5681a


Accession
MI0019281
Symbol
HGNC: MIR5681A
Description
Homo sapiens hsa-mir-5681a precursor miRNA

Literature search
1 open access papers mention hsa-mir-5681a
(1 sentences)

Sequence

23 reads, 4 reads per million, 13 experiments
aguuuuugaagaguauugccacccuuucuagucccuauuagacuAGAAAGGGUGGCAAUACCUCUUccaaaaacu
(((((((((((((((((((((((((((((((((.......)))))))))))))))))))).))))).))))))))

Structure
        -     -                    cc 
aguuuuug aagag uauugccacccuuucuaguc  u
|||||||| ||||| ||||||||||||||||||||  a
ucaaaaac UUCUC AUAACGGUGGGAAAGAucag  u
        c     C                    au 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr8: 74548543-74548617 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from hsa-mir-5681a
Name Accession Chromosome Start End Strand Confidence




Database links

Mature hsa-miR-5681a

Accession MIMAT0022469
Description Homo sapiens hsa-miR-5681a mature miRNA
Sequence 45 - AGAAAGGGUGGCAAUACCUCUU - 66
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21980368
    MicroRNAs associated with metastatic prostate cancer
    Watahiki A, Wang Y, Morris J, Dennis K, O'Dwyer HM, Gleave M, Gout PW, Wang Y
    PLoS One (2011) 6:e24950