Stem-loop ssl-MIR164a

Accession

MI0019341

Description

Salvia sclarea ssl-MIR164a precursor miRNA

Sequence

UGGAGAAGCAGGGCACGUGCAauacuaacucacacacaaacaagacguuuucagacaccuucacacgcgugaaagaguuaguucuucaugugcccaucuucgcca
(((.((((..(((((((((....((((((((.(((.(....(((..(((....)))..))).....).)))...))))))))....)))))))))..)))).)))

Structure

   A    CA         CAau        --a   a -aaac   ac   u 
UGG GAAG  GGGCACGUG    acuaacuc   cac c     aag  guu u
||| ||||  |||||||||    ||||||||   ||| |     |||  |||  
acc cuuc  cccguguac    ugauugag   gug g     uuc  cag c
   g    ua         uucu        aaa   c cacac   ca   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssl-miR164a

• Accession: MIMAT0022507
• Description: Salvia sclarea ssl-miR164a mature miRNA
• Sequence: 1 - UGGAGAAGCAGGGCACGUGCA - 21
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19840835
   One-step identification of conserved miRNAs, their targets, potential transcription factors and effector genes of complete secondary metabolism pathways after 454 pyrosequencing of calyx cDNAs from the Labiate Salvia sclarea L
   "Legrand S, Valot N, Nicole F, Moja S, Baudino S, Jullien F, Magnard JL, Caissard JC, Legendre L"
   "Gene (2010) 450:55-62