Stem-loop ssl-MIR169

Accession

MI0019345

Description

Salvia sclarea ssl-MIR169 precursor miRNA

Sequence

UAGCCAAGGAUGACUUGCCUAuucuugcacgacaucccacucuauuuuuggauguuuuuguuugguuuaguaagcaaguucguccuugggua
((.((((((((((((((((((..((.(((.(((((((............)))))))..)))..))..)))...))))).)))))))))).))

Structure

  G          -     ---   uu  -u   -c       cacuc 
UA CCAAGGAUGA CUUGC   CUA  cu  gca  gacaucc     u
|| |||||||||| |||||   |||  ||  |||  |||||||      
au gguuccugcu gaacg   gau  gg  ugu  uuguagg     a
  g          u     aau   uu  uu   uu       uuuuu 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssl-miR169

• Accession: MIMAT0022511
• Description: Salvia sclarea ssl-miR169 mature miRNA
• Sequence: 1 - UAGCCAAGGAUGACUUGCCUA - 21
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19840835
   One-step identification of conserved miRNAs, their targets, potential transcription factors and effector genes of complete secondary metabolism pathways after 454 pyrosequencing of calyx cDNAs from the Labiate Salvia sclarea L
   "Legrand S, Valot N, Nicole F, Moja S, Baudino S, Jullien F, Magnard JL, Caissard JC, Legendre L"
   "Gene (2010) 450:55-62