Stem-loop ssl-MIR171b

Accession

MI0019347

Description

Salvia sclarea ssl-MIR171b precursor miRNA

Sequence

agcgauauuggugagguucaauccgaagacggauuuacugaugcagcuaguaaagugcgaucucagaUUGAGCCGCGCCAAUAUCACU
((.((((((((((.(((((((((.((.((((.((((((((.......)))).)))).)).)))).))))))))).)))))))))).))

Structure

  c          a         c  a  -  g    -    au 
ag gauauuggug gguucaauc ga ga cg auuu acug  g
|| |||||||||| ||||||||| || || || |||| ||||  c
UC CUAUAACCGC CCGAGUUag cu cu gc ugaa ugau  a
  A          G         a  -  a  g    a    cg 

Annotation confidence Not enough data

Genome context

Unknown

Mature ssl-miR171b

• Accession: MIMAT0022513
• Description: Salvia sclarea ssl-miR171b mature miRNA
• Sequence: 68 - UUGAGCCGCGCCAAUAUCACU - 88
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19840835
   One-step identification of conserved miRNAs, their targets, potential transcription factors and effector genes of complete secondary metabolism pathways after 454 pyrosequencing of calyx cDNAs from the Labiate Salvia sclarea L
   "Legrand S, Valot N, Nicole F, Moja S, Baudino S, Jullien F, Magnard JL, Caissard JC, Legendre L"
   "Gene (2010) 450:55-62