Stem-loop tur-mir-5729b

Accession

MI0019364

Description

Tetranychus urticae tur-mir-5729b precursor miRNA

Sequence

uuACCCUGACCAGUGGUAAGAUAAGCaaaggcuaggggugacgaccucuaagucugcgGAUCGAACCCGGUCAGGGUGC
.((((((((((.(.(((..(((..(((..((((((((((....)))))).)))))))..)))..)))))))))))))).

Structure

u          A U   AA   AA   aa    -      g 
 uACCCUGACC G GGU  GAU  GCa  ggcu aggggu a
 |||||||||| | |||  |||  |||  |||| ||||||  
 GUGGGACUGG C CCA  CUA  cgu  cuga ucucca c
C          - -   AG   Gg   --    a      g 

Annotation confidence Not enough data

Genome context

Unknown

Mature tur-miR-5729b-5p

• Accession: MIMAT0023038
• Description: Tetranychus urticae tur-miR-5729b-5p mature miRNA
• Sequence: 3 - ACCCUGACCAGUGGUAAGAUAAGC - 26
• Evidence: experimental ; Illumina [1]

Mature tur-miR-5729b-3p

• Accession: MIMAT0023039
• Description: Tetranychus urticae tur-miR-5729b-3p mature miRNA
• Sequence: 59 - GAUCGAACCCGGUCAGGGUGC - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22113690
   The genome of Tetranychus urticae reveals herbivorous pest adaptations
   "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
   "Nature (2011) 479:487-492