Stem-loop tur-mir-5737

Accession

MI0019401

Description

Tetranychus urticae tur-mir-5737 precursor miRNA

Sequence

aucaucacuagcuacUAAUCUCAACCGAUGAAUCCGAGuguaauauaguaaagucucuCGGAUUCUCGAUUGGGGUUUUguaguuagugaugac
.((((((((((((((.((((((((.(((.(((((((((.(..............).)))))))))))).))))))))..)))))))))))))).

Structure

a              -U        C   U         u uaauau 
 ucaucacuagcuac  AAUCUCAA CGA GAAUCCGAG g      a
 ||||||||||||||  |||||||| ||| ||||||||| |       
 aguagugauugaug  UUGGGGUU GCU CUUAGGCuc c      g
c              UU        A   -         u ugaaau 

Annotation confidence Not enough data

Genome context

emb|HE587311|: 1901289-1901382 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from tur-mir-5737

Mature tur-miR-5737-5p

• Accession: MIMAT0023104
• Description: Tetranychus urticae tur-miR-5737-5p mature miRNA
• Sequence: 16 - UAAUCUCAACCGAUGAAUCCGAG - 38
• Evidence: experimental ; Illumina [1]

Mature tur-miR-5737-3p

• Accession: MIMAT0023105
• Description: Tetranychus urticae tur-miR-5737-3p mature miRNA
• Sequence: 59 - CGGAUUCUCGAUUGGGGUUUU - 79
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22113690
   The genome of Tetranychus urticae reveals herbivorous pest adaptations
   "Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouze P, Grbic V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, Hernandez-Crespo P, Diaz I, Martinez M, Navajas M, Sucena E, Magalhaes S, Nagy L, Pace RM, Djuranovic S, Smagghe G, Iga M, Christiaens O, Veenstra JA"
   "Nature (2011) 479:487-492