miRBase entry: vun-MIR156a

Stem-loop vun-MIR156a


Accession
MI0019565
Description
Vigna unguiculata vun-MIR156a precursor miRNA

Literature search
2 open access papers mention vun-MIR156a
(7 sentences)

Sequence

gaaauUGACAGAAGAGAGUGAGCACacagaggcaccugguauagucauacacuguuacuuuugcgugcucacuucucuuucugucaacuuccag
(((.(((((((((((((((((((((.((((((.((...((((....))))...))..)))))).)))))))).)))).))))))))).)))...

Structure
---   a         -    -        a      -c  cug    a 
   gaa uUGACAGAA GAGA GUGAGCAC cagagg  ac   guau g
   ||| ||||||||| |||| |||||||| ||||||  ||   ||||  
   cuu aacugucuu cucu cacucgug guuuuc  ug   caua u
gac   c         u    u        c      au  uca    c 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
Unknown

Database links

Mature vun-miR156a

Accession MIMAT0022752
Description Vigna unguiculata vun-miR156a mature miRNA
Sequence 6 - UGACAGAAGAGAGUGAGCAC - 25
Evidence experimental
cloned [1]

References

  1. Identification and validation of conserved microRNAs along with their differential expression in roots of Vigna unguiculata grown under salt stress
    "Paul S, Kundu A, Pal A"
    "Plant Cell Tissue Organ Culture. (2011) 105:233-242