Stem-loop sha-mir-92a

Accession

MI0019661

Description

Sarcophilus harrisii sha-mir-92a precursor miRNA

Sequence

uguugcauuacuugaucuugugucuguaagagUAUUGCACUUGUCCCGGCcuguggaggaaaagaggacuuaucgucaguuccugucaggaucgaaaaggggccgagcuggcugguuugcuguugucggguggaucacgaugcaauuuug
.((((((((...((((((....(((((((.((((..((.((((((((..((((.(.(((((..((.((....)).))..))))).)))))........)))).))))...)).....)))).))).)))).)))))).))))))))....

Structure

---u        acu      ugug    -   g    ---UU  --A    -    ------GG    u g     aa  g  c 
    guugcauu   ugaucu    ucug uaa agUA     GC   CUUG UCCC        Ccug g aggaa  ga ga u
    ||||||||   ||||||    |||| ||| ||||     ||   |||| ||||        |||| | |||||  || ||  
    uaacguag   acuagg    gggc guu ucgu     cg   gagc gggg        ggac u uccuu  cu cu u
guuu        --c      ---u    u   g    uuggu  guc    c    aaaagcua    - g     ga  g  a 

Annotation confidence Not enough data

Genome context

Unknown

Mature sha-miR-92a

• Accession: MIMAT0022832
• Description: Sarcophilus harrisii sha-miR-92a mature miRNA
• Sequence: 33 - UAUUGCACUUGUCCCGGC - 50
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20044575
   The Tasmanian devil transcriptome reveals Schwann cell origins of a clonally transmissible cancer
   "Murchison EP, Tovar C, Hsu A, Bender HS, Kheradpour P, Rebbeck CA, Obendorf D, Conlan C, Bahlo M, Blizzard CA, Pyecroft S, Kreiss A, Kellis M, Stark A, Harkins TT, Marshall Graves JA, Woods GM, Hannon GJ, Papenfuss AT"
   "Science (2010) 327:84-87