Stem-loop mtr-MIR5740

Accession

MI0019662

Description

Medicago truncatula mtr-MIR5740 precursor miRNA

Sequence

agagcaugccUGAACAGAAAGAACAUUUGGCugagugggagaggguauacuuguaacacuugauuuggaucuguuuggauaaauaacuuaauaauuaacgucagcccucucccacucagccaaauguuuuuuucuguucaggcgugcuca
.(((((((((((((((((((((((((((((((((((((((((((((..(((((...............((((....))))...............))).))..))))))))))))))))))))))).)))))))))))))))))))))).

Structure

a                      -                       au  -   uaacacuugauuugg    g 
 gagcaugccUGAACAGAAAGAA CAUUUGGCugagugggagagggu  ac uug               aucu u
 |||||||||||||||||||||| |||||||||||||||||||||||  || |||               ||||  
 cucgugcggacuugucuuuuuu guaaaccgacucacccucucccg  ug aau               uagg u
a                      u                       ac  c   uaauaauucaauaaa    u 

Annotation confidence Not enough data

Genome context

chr1: 4699041-4699190 [+]

Mature mtr-miR5740

• Accession: MIMAT0023117
• Description: Medicago truncatula mtr-miR5740 mature miRNA
• Sequence: 11 - UGAACAGAAAGAACAUUUGGC - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553