Stem-loop mtr-MIR5743a

Accession

MI0019666

Description

Medicago truncatula mtr-MIR5743a precursor miRNA

Sequence

uuuuuuuggaUGAGAACUGUUUUCCGCACCUUuggaaauacaaacaaacaaaggugggaaaacauuucucaucuaaacaau
....((((((((((((.((((((((.((((((((..............)))))))))))))))).))))))))))))....

Structure

uuuu            C        G        gaaaua 
    uuuggaUGAGAA UGUUUUCC CACCUUug      c
    |||||||||||| |||||||| ||||||||       
    aaaucuacucuu acaaaagg guggaaac      a
uaac            u        -        aaacaa 

Annotation confidence Not enough data

Genome context

chr1: 8428934-8429014 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from mtr-MIR5743a

Mature mtr-miR5743a

• Accession: MIMAT0023121
• Description: Medicago truncatula mtr-miR5743a mature miRNA
• Sequence: 11 - UGAGAACUGUUUUCCGCACCUU - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22156213
   MicroRNAs as master regulators of the plant NB-LRR defense gene family via the production of phased, trans-acting siRNAs
   "Zhai J, Jeong DH, De Paoli E, Park S, Rosen BD, Li Y, Gonzalez AJ, Yan Z, Kitto SL, Grusak MA, Jackson SA, Stacey G, Cook DR, Green PJ, Sherrier DJ, Meyers BC"
   "Genes Dev (2011) 25:2540-2553